Information Science and Engineering Lab

We perform teaching and research in machine learning strategies for the pattern analysis of various kinds of data. This comprises statistical models for clustering, graphical models for network inference and algorithmic methods to efficiently find these structures in the data.

Contact Info
CAB F 61.1
Universitaetstrasse 6,
8092 Zurich
Schweiz

+41 44 632 64 96

Follow Us

Information Science and Engineering Lab

We perform teaching and research in machine learning strategies for the pattern analysis of various kinds of data. This comprises statistical models for clustering, graphical models for network inference and algorithmic methods to efficiently find these structures in the data.

Contact Info
CAB F 61.1
Universitaetstrasse 6,
8092 Zurich
Schweiz

+41 44 632 64 96

Follow Us

Journal Article - page 2

Semiautomatic Assessment of the Terminal Ileum and Colon in Patients with Crohn Disease Using MRI (the VIGOR++ Project)

Carl A.J. Puylaert, Peter J. Schüffler, Robiel E. Naziroglu, Jeroen A.W. Tielbeek, Li Zhang, Jesica C. Makanyanga, Charlotte J. Tutein Nolthenius, C. Yung Nio, Doug A. Pendsé, Alex Menys, Cyriel Y. Ponsioen, David Atkinson, Alastair Forbes, Joachim M. Buhmann, Thomas J. Fuchs, Haralambos Hatzakis, Lucas J. van Vliet, Jaap Stoker, Stuart A. Taylor, Frans M. Vos,

Academic Radiology, 25

Research Collection

Robust optimization in the presence of uncertainty: A generic approach

Joachim M. Buhmann, Alexey Gronskiy, Matúš Mihalák, Tobias Pröger, Rastislav Šrámek, Peter Widmayer,

Journal of Computer and System Sciences, 94

DOI: 10.3929/ethz-b-000225634      Research Collection

We propose a novel approach for optimization under uncertainty. Our approach does not assume any particular noise model behind the measurements, and only requires two typical instances. We first propose a measure of similarity of instances (with respect to a given objective). Based on this measure, we then choose a solution randomly among all solutions that are near-optimum for both instances. The exact notion of near-optimum is intertwined with the proposed similarity measure. Our similarity measure also allows us to...

Posterior agreement for large parameter-rich optimization problems

Joachim M. Buhmann, Julien Dumazert, Alexey Gronskiy, Wojciech Szpankowski,

Theoretical Computer Science, 745

DOI: 10.3929/ethz-b-000287900      Research Collection

Pipeline validation for connectivity-based cortex parcellation

Nico S. Gorbach, Marc Tittgemeyer, Joachim M. Buhmann,

NeuroImage, 181

Research Collection

Automatic Human Sleep Stage Scoring Using Deep Neural Networks

Alexander Malafeev, Dmitry Laptev, Stefan Bauer, Ximena Omlin, Aleksandra Wierzbicka, Adam Wichniak, Wojciech Jernajczyk, Robert Riener, Joachim Buhmann, Peter Achermann,

Frontiers in Neuroscience, 12

DOI: 10.3929/ethz-b-000304711      Research Collection

The classification of sleep stages is the first and an important step in the quantitative analysis of polysomnographic recordings. Sleep stage scoring relies heavily on visual pattern recognition by a human expert and is time consuming and subjective. Thus, there is a need for automatic classification. In this work we developed machine learning algorithms for sleep classification: random forest (RF) classification based on features and artificial neural networks (ANNs) working both with features and raw data. We tested our methods...

A generative model of whole-brain effective connectivity

Stefan Frässle, Ekaterina I. Lomakina, Lars Kasper, Zina M. Manjaly, Alex Leff, Klaas P. Prüssmann, Joachim M. Buhmann, Klaas Stephan,

NeuroImage, 179

DOI: 10.3929/ethz-b-000275013      Research Collection

The development of whole-brain models that can infer effective (directed) connection strengths from fMRI data represents a central challenge for computational neuroimaging. A recently introduced generative model of fMRI data, regression dynamic causal modeling (rDCM), moves towards this goal as it scales gracefully to very large networks. However, large-scale networks with thousands of connections are difficult to interpret; additionally, one typically lacks information (data points per free parameter) for precise estimation of all model parameters. This paper introduces sparsity constraints...

Regression DCM for fMRI

Stefan Frässle, Ekaterina I. Lomakina, Adeel Razi, Karl J. Friston, Joachim M. Buhmann, Klaas Stephan,

NeuroImage, 155

Research Collection

Glaucoma detection using entropy sampling and ensemble learning for automatic optic cup and disc segmentation

Julian Zilly, Joachim M. Buhmann, Dwarikanath Mahapatra,

Computerized medical imaging and graphics, 55

Research Collection

Visual saliency-based active learning for prostate magnetic resonance imaging segmentation

Dwarikanath Mahapatra, Joachim M. Buhmann,

Journal of Medical Imaging, 3

Research Collection

Oxygen supply maps for hypoxic microenvironment visualization in prostate cancer

Niels J. Rupp, Peter J. Schüffler, Qing Zhong, Florian Falkner, Markus Rechsteiner, Jan H. Rüschoff, Christian Fankhauser, Matthias Drach, Remo Largo, Mathias Tremp, Cedric Poyet, Tullio Sulser, Glen Kristiansen, Holger Moch, Joachim M. Buhmann, Michael Müntener, Peter J. Wild,

Journal of Pathology Informatics, 7

Research Collection